Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm4875-201ENSMUST00000118257 786 ntBASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vcpip1Q8CDG3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.42□□□□□ -0.1
Vcpip1Q8CDG3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms