Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pabpn1Q8CCS6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Gm14274-201ENSMUST00000117182 615 ntBASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1Q8CCS6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Gm23596-201ENSMUST00000104304 132 ntBASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Gm44291-201ENSMUST00000203102 2865 ntBASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1Q8CCS6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Ptprs-211ENSMUST00000223859 5588 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Gm22133-201ENSMUST00000102082 109 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Gm22144-201ENSMUST00000157402 102 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 AC168279.1-201ENSMUST00000214611 382 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Gm12020-201ENSMUST00000119030 2042 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 Gm6992-201ENSMUST00000217973 1607 ntBASIC20.24■□□□□ 0.83
Pabpn1Q8CCS6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Ighv2-1-201ENSMUST00000170946 353 ntBASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm43520-201ENSMUST00000197996 164 ntBASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm45500-201ENSMUST00000211676 803 ntBASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms