Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alx1Q8C8B0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Alx1Q8C8B0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Alx1Q8C8B0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Alx1Q8C8B0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.58■□□□□ 0.09
Alx1Q8C8B0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.58■□□□□ 0.09
Alx1Q8C8B0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Alx1Q8C8B0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Gm16177-201ENSMUST00000120728 718 ntBASIC15.58■□□□□ 0.08
Alx1Q8C8B0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Gm4271-201ENSMUST00000174444 973 ntBASIC15.58■□□□□ 0.08
Alx1Q8C8B0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alx1Q8C8B0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Gm4984-201ENSMUST00000115987 360 ntBASIC15.57■□□□□ 0.08
Alx1Q8C8B0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms