Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.67■□□□□ 0.1
Usp44Q8C2S0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp44Q8C2S0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Mir874-201ENSMUST00000104769 76 ntBASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gm11978-201ENSMUST00000122315 466 ntBASIC15.66■□□□□ 0.1
Usp44Q8C2S0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gm8598-201ENSMUST00000221184 836 ntBASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp44Q8C2S0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.65■□□□□ 0.1
Usp44Q8C2S0 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gm10012-201ENSMUST00000078252 192 ntBASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms