Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.68■□□□□ 0.42
Cps1Q8C196 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cps1Q8C196 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm6963-201ENSMUST00000147879 379 ntBASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm9555-201ENSMUST00000200908 583 ntBASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm44100-201ENSMUST00000204329 436 ntBASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm44651-201ENSMUST00000207343 372 ntBASIC17.67■□□□□ 0.42
Cps1Q8C196 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cps1Q8C196 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC17.67■□□□□ 0.42
Cps1Q8C196 Gm7003-201ENSMUST00000195089 312 ntBASIC17.67■□□□□ 0.42
Cps1Q8C196 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cps1Q8C196 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cps1Q8C196 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm12380-201ENSMUST00000119012 544 ntBASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm27552-201ENSMUST00000183351 62 ntBASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm27844-201ENSMUST00000183613 62 ntBASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm42997-202ENSMUST00000200321 985 ntBASIC17.66■□□□□ 0.42
Cps1Q8C196 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm19994-201ENSMUST00000217086 586 ntBASIC17.66■□□□□ 0.42
Cps1Q8C196 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Cps1Q8C196 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cps1Q8C196 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cps1Q8C196 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.65■□□□□ 0.42
Cps1Q8C196 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Gm12286-201ENSMUST00000119246 1002 ntBASIC17.65■□□□□ 0.42
Cps1Q8C196 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC17.65■□□□□ 0.42
Cps1Q8C196 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Gm20426-201ENSMUST00000173657 440 ntBASIC17.65■□□□□ 0.42
Cps1Q8C196 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cps1Q8C196 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cps1Q8C196 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cps1Q8C196 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cps1Q8C196 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cps1Q8C196 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cps1Q8C196 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cps1Q8C196 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms