Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
Trub1Q8C0D0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trub1Q8C0D0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trub1Q8C0D0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm7488-201ENSMUST00000117148 684 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm13689-201ENSMUST00000119360 685 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trub1Q8C0D0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Gm12859-201ENSMUST00000117834 427 ntBASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Mir7221-201ENSMUST00000184009 72 ntBASIC13.82□□□□□ -0.2
Trub1Q8C0D0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trub1Q8C0D0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Gm38223-201ENSMUST00000194484 695 ntBASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trub1Q8C0D0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms