Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Proscos-202ENSMUST00000178990 666 ntBASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.71□□□□□ -0.21
Nup54Q8BTS4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup54Q8BTS4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.71□□□□□ -0.21
Nup54Q8BTS4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup54Q8BTS4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Gm14350-201ENSMUST00000116642 640 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Gm11803-201ENSMUST00000119966 444 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Gm10156-201ENSMUST00000122364 462 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Gm24196-201ENSMUST00000179161 110 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Gm7561-201ENSMUST00000211203 886 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup54Q8BTS4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm8213-201ENSMUST00000118191 441 ntBASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm27847-201ENSMUST00000183711 107 ntBASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm27375-201ENSMUST00000183799 107 ntBASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm45841-201ENSMUST00000207700 164 ntBASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.69□□□□□ -0.22
Nup54Q8BTS4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms