Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Gm43179-201ENSMUST00000198797 275 ntBASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scfd1Q8BRF7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Mir1247-201ENSMUST00000116706 82 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm16379-201ENSMUST00000161469 348 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm8762-201ENSMUST00000193486 339 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm43118-201ENSMUST00000199149 775 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scfd1Q8BRF7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms