Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Gm10109-202ENSMUST00000206890 1211 ntBASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.24■□□□□ 0.35
Col16a1Q8BLX7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm45770-201ENSMUST00000212105 616 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm9826-201ENSMUST00000029124 1299 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm12058-201ENSMUST00000118614 437 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm27552-201ENSMUST00000183351 62 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm27844-201ENSMUST00000183613 62 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm19931-201ENSMUST00000198920 368 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gm5904-201ENSMUST00000210286 865 ntBASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col16a1Q8BLX7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Gm8018-201ENSMUST00000173536 789 ntBASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Gm37666-201ENSMUST00000194110 866 ntBASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms