Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Crry-ps-201ENSMUST00000079090 1309 ntBASIC18.7■□□□□ 0.58
Usp54Q8BL06 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.7■□□□□ 0.58
Usp54Q8BL06 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Gm19931-201ENSMUST00000198920 368 ntBASIC18.7■□□□□ 0.58
Usp54Q8BL06 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 AC153974.2-201ENSMUST00000218577 1025 ntBASIC18.7■□□□□ 0.58
Usp54Q8BL06 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 AC108416.1-202ENSMUST00000228927 1201 ntBASIC18.7■□□□□ 0.58
Usp54Q8BL06 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.7■□□□□ 0.58
Usp54Q8BL06 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Usp54Q8BL06 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.69■□□□□ 0.58
Usp54Q8BL06 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Gm14267-206ENSMUST00000226870 1209 ntBASIC18.69■□□□□ 0.58
Usp54Q8BL06 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Mir339-201ENSMUST00000083659 96 ntBASIC18.69■□□□□ 0.58
Usp54Q8BL06 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.69■□□□□ 0.58
Usp54Q8BL06 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp54Q8BL06 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp54Q8BL06 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm8959-201ENSMUST00000213150 571 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 AC131330.1-201ENSMUST00000227814 1015 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm5884-201ENSMUST00000036712 1479 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm11331-201ENSMUST00000119764 288 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm34767-201ENSMUST00000191813 1062 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Gm45925-201ENSMUST00000218882 744 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 AC125209.1-201ENSMUST00000225812 766 ntBASIC18.68■□□□□ 0.58
Usp54Q8BL06 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Usp54Q8BL06 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms