Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Gm2213-201ENSMUST00000197485 688 ntBASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2bQ8BJF9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2bQ8BJF9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2bQ8BJF9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms