Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4dQ8BGV9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4dQ8BGV9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atg4dQ8BGV9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Acot6-202ENSMUST00000222921 3622 ntBASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4dQ8BGV9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Proscos-202ENSMUST00000178990 666 ntBASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Gm5745-201ENSMUST00000183748 313 ntBASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4dQ8BGV9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms