Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.07□□□□□ -0.32
Trim50Q810I2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.07□□□□□ -0.32
Trim50Q810I2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.07□□□□□ -0.32
Trim50Q810I2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gm12341-201ENSMUST00000119724 503 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Gm37917-201ENSMUST00000194711 392 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim50Q810I2 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.06□□□□□ -0.32
Trim50Q810I2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Trim50Q810I2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim50Q810I2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.05□□□□□ -0.32
Trim50Q810I2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm18624-201ENSMUST00000220966 658 ntBASIC13.05□□□□□ -0.32
Trim50Q810I2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.05□□□□□ -0.32
Trim50Q810I2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.05□□□□□ -0.32
Trim50Q810I2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim50Q810I2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms