Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm12585-201ENSMUST00000117307 290 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm15693-201ENSMUST00000120470 637 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm27533-201ENSMUST00000183800 152 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm10766-202ENSMUST00000194123 606 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm2756-201ENSMUST00000195851 400 ntBASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Vma21Q78T54 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Vma21Q78T54 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vma21Q78T54 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.91□□□□□ -0.66
Vma21Q78T54 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms