Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc46a1Q6PEM8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gm15770-201ENSMUST00000117498 584 ntBASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gm6091-201ENSMUST00000098307 165 ntBASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc46a1Q6PEM8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm2445-201ENSMUST00000182798 989 ntBASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc46a1Q6PEM8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms