Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm24830-201ENSMUST00000102024 166 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm14726-201ENSMUST00000120623 896 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm8738-201ENSMUST00000172606 329 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm25890-201ENSMUST00000177643 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm22614-201ENSMUST00000178300 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm28693-202ENSMUST00000190758 331 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm22042-201ENSMUST00000082989 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm26232-201ENSMUST00000083360 166 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm24136-201ENSMUST00000083374 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Gm26110-201ENSMUST00000083971 165 ntBASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snrnp40Q6PE01 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms