Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gm9385-201ENSMUST00000117563 472 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gm17968-201ENSMUST00000194902 784 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf220Q6PDX6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Gm10275-202ENSMUST00000168697 495 ntBASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Gm10275-201ENSMUST00000092620 635 ntBASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf220Q6PDX6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms