Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Gm11618-201ENSMUST00000117946 267 ntBASIC16.97■□□□□ 0.31
Clcn1Q64347 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.97■□□□□ 0.31
Clcn1Q64347 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clcn1Q64347 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.97■□□□□ 0.31
Clcn1Q64347 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.97■□□□□ 0.31
Clcn1Q64347 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.97■□□□□ 0.31
Clcn1Q64347 Gm38341-201ENSMUST00000195357 515 ntBASIC16.97■□□□□ 0.31
Clcn1Q64347 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.97■□□□□ 0.31
Clcn1Q64347 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC16.97■□□□□ 0.31
Clcn1Q64347 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn1Q64347 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.96■□□□□ 0.31
Clcn1Q64347 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.96■□□□□ 0.31
Clcn1Q64347 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.96■□□□□ 0.31
Clcn1Q64347 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Gm15236-201ENSMUST00000117309 379 ntBASIC16.96■□□□□ 0.31
Clcn1Q64347 Gm15808-201ENSMUST00000119046 604 ntBASIC16.96■□□□□ 0.31
Clcn1Q64347 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.96■□□□□ 0.31
Clcn1Q64347 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Clcn1Q64347 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Clcn1Q64347 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.96■□□□□ 0.31
Clcn1Q64347 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clcn1Q64347 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Clcn1Q64347 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn1Q64347 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Clcn1Q64347 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Clcn1Q64347 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.96■□□□□ 0.3
Clcn1Q64347 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.96■□□□□ 0.3
Clcn1Q64347 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.95■□□□□ 0.3
Clcn1Q64347 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Gm9368-201ENSMUST00000219348 831 ntBASIC16.95■□□□□ 0.3
Clcn1Q64347 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Clcn1Q64347 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn1Q64347 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clcn1Q64347 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Gm6754-201ENSMUST00000117124 913 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clcn1Q64347 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.94■□□□□ 0.3
Clcn1Q64347 Gm42627-201ENSMUST00000197347 224 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms