Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim28Q62318 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim28Q62318 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim28Q62318 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim28Q62318 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim28Q62318 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim28Q62318 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.26■□□□□ 0.35
Trim28Q62318 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim28Q62318 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim28Q62318 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.25■□□□□ 0.35
Trim28Q62318 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim28Q62318 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.25■□□□□ 0.35
Trim28Q62318 Gm7046-201ENSMUST00000221351 977 ntBASIC17.25■□□□□ 0.35
Trim28Q62318 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.25■□□□□ 0.35
Trim28Q62318 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.25■□□□□ 0.35
Trim28Q62318 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim28Q62318 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim28Q62318 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Trim28Q62318 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim28Q62318 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Trim28Q62318 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim28Q62318 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim28Q62318 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.24■□□□□ 0.35
Trim28Q62318 Gm19931-201ENSMUST00000198920 368 ntBASIC17.24■□□□□ 0.35
Trim28Q62318 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.24■□□□□ 0.35
Trim28Q62318 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.24■□□□□ 0.35
Trim28Q62318 Gm5781-201ENSMUST00000219792 443 ntBASIC17.24■□□□□ 0.35
Trim28Q62318 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.24■□□□□ 0.35
Trim28Q62318 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim28Q62318 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim28Q62318 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim28Q62318 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim28Q62318 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim28Q62318 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.23■□□□□ 0.35
Trim28Q62318 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Gm13297-201ENSMUST00000120205 934 ntBASIC17.23■□□□□ 0.35
Trim28Q62318 Gm14704-201ENSMUST00000120300 874 ntBASIC17.23■□□□□ 0.35
Trim28Q62318 Gm13316-201ENSMUST00000140537 691 ntBASIC17.23■□□□□ 0.35
Trim28Q62318 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim28Q62318 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim28Q62318 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Gm43758-201ENSMUST00000199500 367 ntBASIC17.23■□□□□ 0.35
Trim28Q62318 Cts7-204ENSMUST00000225321 1257 ntBASIC17.23■□□□□ 0.35
Trim28Q62318 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Trim28Q62318 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim28Q62318 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Trim28Q62318 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim28Q62318 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms