Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trim27Q62158 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trim27Q62158 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gm15429-201ENSMUST00000151268 798 ntBASIC16.45■□□□□ 0.22
Trim27Q62158 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim27Q62158 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.45■□□□□ 0.22
Trim27Q62158 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim27Q62158 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.45■□□□□ 0.22
Trim27Q62158 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim27Q62158 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim27Q62158 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim27Q62158 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trim27Q62158 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim27Q62158 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim27Q62158 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.45■□□□□ 0.22
Trim27Q62158 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim27Q62158 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.44■□□□□ 0.22
Trim27Q62158 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim27Q62158 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim27Q62158 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim27Q62158 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Gm44397-201ENSMUST00000195950 113 ntBASIC16.44■□□□□ 0.22
Trim27Q62158 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.44■□□□□ 0.22
Trim27Q62158 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim27Q62158 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim27Q62158 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trim27Q62158 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim27Q62158 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim27Q62158 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim27Q62158 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim27Q62158 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.43■□□□□ 0.22
Trim27Q62158 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim27Q62158 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.43■□□□□ 0.22
Trim27Q62158 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.43■□□□□ 0.22
Trim27Q62158 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim27Q62158 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim27Q62158 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim27Q62158 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim27Q62158 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim27Q62158 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim27Q62158 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms