Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm5866-201ENSMUST00000177881 973 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm9522-201ENSMUST00000182394 926 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm7730-201ENSMUST00000212486 454 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.68□□□□□ -0.7
Foxc2Q61850 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc2Q61850 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc2Q61850 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm8584-201ENSMUST00000171982 758 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm24694-201ENSMUST00000180054 110 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm27663-201ENSMUST00000184839 110 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm44855-201ENSMUST00000205725 362 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc2Q61850 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.67□□□□□ -0.7
Foxc2Q61850 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc2Q61850 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Foxc2Q61850 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms