Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.59■□□□□ 0.41
Gli3Q61602 Gm9230-201ENSMUST00000188228 532 ntBASIC17.59■□□□□ 0.41
Gli3Q61602 Gm5733-201ENSMUST00000190232 939 ntBASIC17.59■□□□□ 0.41
Gli3Q61602 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.59■□□□□ 0.41
Gli3Q61602 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gli3Q61602 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gli3Q61602 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gli3Q61602 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Gli3Q61602 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC17.58■□□□□ 0.41
Gli3Q61602 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC17.58■□□□□ 0.41
Gli3Q61602 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC17.58■□□□□ 0.41
Gli3Q61602 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.58■□□□□ 0.41
Gli3Q61602 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.58■□□□□ 0.41
Gli3Q61602 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gli3Q61602 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.58■□□□□ 0.4
Gli3Q61602 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gli3Q61602 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm4879-201ENSMUST00000122190 1272 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm25201-201ENSMUST00000083093 170 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm15036-201ENSMUST00000118880 400 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Ighv2-1-201ENSMUST00000170946 353 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm28388-201ENSMUST00000186262 437 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.57■□□□□ 0.4
Gli3Q61602 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC17.57■□□□□ 0.4
Gli3Q61602 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.57■□□□□ 0.4
Gli3Q61602 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.57■□□□□ 0.4
Gli3Q61602 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gli3Q61602 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gli3Q61602 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gli3Q61602 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.56■□□□□ 0.4
Gli3Q61602 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.56■□□□□ 0.4
Gli3Q61602 Gm12990-201ENSMUST00000120372 468 ntBASIC17.56■□□□□ 0.4
Gli3Q61602 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.56■□□□□ 0.4
Gli3Q61602 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Gli3Q61602 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.56■□□□□ 0.4
Gli3Q61602 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC17.56■□□□□ 0.4
Gli3Q61602 Gm6905-201ENSMUST00000205729 511 ntBASIC17.56■□□□□ 0.4
Gli3Q61602 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Gli3Q61602 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gli3Q61602 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms