Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox17Q61473 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox17Q61473 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox17Q61473 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.56□□□□□ -0.4
Sox17Q61473 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox17Q61473 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.56□□□□□ -0.4
Sox17Q61473 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.56□□□□□ -0.4
Sox17Q61473 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox17Q61473 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox17Q61473 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox17Q61473 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.56□□□□□ -0.4
Sox17Q61473 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Sox17Q61473 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox17Q61473 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox17Q61473 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Gm12260-201ENSMUST00000122447 411 ntBASIC12.55□□□□□ -0.4
Sox17Q61473 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox17Q61473 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox17Q61473 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.55□□□□□ -0.4
Sox17Q61473 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox17Q61473 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sox17Q61473 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.55□□□□□ -0.4
Sox17Q61473 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.55□□□□□ -0.4
Sox17Q61473 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox17Q61473 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sox17Q61473 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox17Q61473 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sox17Q61473 Gm18766-201ENSMUST00000189811 808 ntBASIC12.54□□□□□ -0.4
Sox17Q61473 Gm45612-201ENSMUST00000211320 160 ntBASIC12.54□□□□□ -0.4
Sox17Q61473 Dupd1-202ENSMUST00000224735 548 ntBASIC12.54□□□□□ -0.4
Sox17Q61473 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.54□□□□□ -0.4
Sox17Q61473 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sox17Q61473 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox17Q61473 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sox17Q61473 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox17Q61473 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms