Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc88aQ5SNZ0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc88aQ5SNZ0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.26■□□□□ 0.03
Ccdc88aQ5SNZ0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc88aQ5SNZ0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc88aQ5SNZ0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm6222-202ENSMUST00000182143 629 ntBASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm21769-201ENSMUST00000211922 111 ntBASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm11964-201ENSMUST00000120982 444 ntBASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm24990-201ENSMUST00000157406 323 ntBASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm22902-201ENSMUST00000158488 302 ntBASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc88aQ5SNZ0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm28693-202ENSMUST00000190758 331 ntBASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc88aQ5SNZ0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc88aQ5SNZ0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms