Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5d-4Q5R1F6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav5d-4Q5R1F6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm25925-201ENSMUST00000158314 306 ntBASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm24694-201ENSMUST00000180054 110 ntBASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm27663-201ENSMUST00000184839 110 ntBASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm20949-201ENSMUST00000206478 952 ntBASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms