Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm17271-201ENSMUST00000165535 355 ntBASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm18049-201ENSMUST00000208909 581 ntBASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms