Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm14042-201ENSMUST00000120139 833 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm5682-201ENSMUST00000173402 505 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm2272-201ENSMUST00000194903 582 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gm18246-201ENSMUST00000221023 728 ntBASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3-3Q5R1C3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms