Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Mir874-201ENSMUST00000104769 76 ntBASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gm15460-201ENSMUST00000118147 391 ntBASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gm13385-201ENSMUST00000121089 220 ntBASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43aQ3TL54 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Mir7023-201ENSMUST00000185093 64 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.23□□□□□ -0.13
Trim43aQ3TL54 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43aQ3TL54 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms