Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gm23935-201ENSMUST00000102303 57 ntBASIC13.18□□□□□ -0.3
Q3KNL4 Gm24270-201ENSMUST00000102326 57 ntBASIC13.18□□□□□ -0.3
Q3KNL4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.18□□□□□ -0.3
Q3KNL4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.18□□□□□ -0.3
Q3KNL4 Gm24245-201ENSMUST00000157318 57 ntBASIC13.18□□□□□ -0.3
Q3KNL4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.18□□□□□ -0.3
Q3KNL4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.18□□□□□ -0.3
Q3KNL4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q3KNL4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.18□□□□□ -0.3
Q3KNL4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Q3KNL4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3KNL4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q3KNL4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Q3KNL4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.17□□□□□ -0.3
Q3KNL4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Gm6912-201ENSMUST00000117218 544 ntBASIC13.17□□□□□ -0.3
Q3KNL4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Gm27618-201ENSMUST00000183671 60 ntBASIC13.17□□□□□ -0.3
Q3KNL4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Q3KNL4 Gm38294-201ENSMUST00000192831 381 ntBASIC13.17□□□□□ -0.3
Q3KNL4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.17□□□□□ -0.3
Q3KNL4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Q3KNL4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Q3KNL4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Q3KNL4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Q3KNL4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Q3KNL4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3KNL4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.16□□□□□ -0.3
Q3KNL4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.16□□□□□ -0.3
Q3KNL4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Q3KNL4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms