Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Tff1Q08423 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Gm5566-201ENSMUST00000116118 459 ntBASIC11.17□□□□□ -0.62
Tff1Q08423 Gm12859-201ENSMUST00000117834 427 ntBASIC11.17□□□□□ -0.62
Tff1Q08423 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.17□□□□□ -0.62
Tff1Q08423 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.17□□□□□ -0.62
Tff1Q08423 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.17□□□□□ -0.62
Tff1Q08423 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tff1Q08423 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
Tff1Q08423 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.17□□□□□ -0.62
Tff1Q08423 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tff1Q08423 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.17□□□□□ -0.62
Tff1Q08423 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.17□□□□□ -0.62
Tff1Q08423 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Tff1Q08423 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.16□□□□□ -0.62
Tff1Q08423 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Tff1Q08423 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Mir1897-201ENSMUST00000122581 272 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.16□□□□□ -0.62
Tff1Q08423 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Tff1Q08423 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Gm27680-201ENSMUST00000184192 160 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 Gm6745-201ENSMUST00000199216 526 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.16□□□□□ -0.62
Tff1Q08423 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tff1Q08423 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.16□□□□□ -0.62
Tff1Q08423 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tff1Q08423 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tff1Q08423 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Tff1Q08423 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Tff1Q08423 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tff1Q08423 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tff1Q08423 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Tff1Q08423 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.15□□□□□ -0.62
Tff1Q08423 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Gm11478-201ENSMUST00000117851 599 ntBASIC11.15□□□□□ -0.62
Tff1Q08423 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.15□□□□□ -0.62
Tff1Q08423 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.15□□□□□ -0.62
Tff1Q08423 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Gm7775-201ENSMUST00000218871 853 ntBASIC11.15□□□□□ -0.62
Tff1Q08423 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tff1Q08423 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tff1Q08423 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tff1Q08423 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms