Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm29608-201ENSMUST00000190444 463 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm7561-201ENSMUST00000211203 886 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm10012-201ENSMUST00000078252 192 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Acot6-202ENSMUST00000222921 3622 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.03□□□□□ -0.16
Cntn3Q07409 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.03□□□□□ -0.16
Cntn3Q07409 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.03□□□□□ -0.16
Cntn3Q07409 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cntn3Q07409 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cntn3Q07409 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.03□□□□□ -0.16
Cntn3Q07409 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cntn3Q07409 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.03□□□□□ -0.16
Cntn3Q07409 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cntn3Q07409 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cntn3Q07409 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.02□□□□□ -0.16
Cntn3Q07409 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cntn3Q07409 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cntn3Q07409 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.02□□□□□ -0.16
Cntn3Q07409 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.02□□□□□ -0.16
Cntn3Q07409 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cntn3Q07409 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cntn3Q07409 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.02□□□□□ -0.17
Cntn3Q07409 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Gm5687-201ENSMUST00000118252 640 ntBASIC14.02□□□□□ -0.17
Cntn3Q07409 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.02□□□□□ -0.17
Cntn3Q07409 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.02□□□□□ -0.17
Cntn3Q07409 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms