Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.18□□□□□ -0.3
Sox4Q06831 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.18□□□□□ -0.3
Sox4Q06831 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sox4Q06831 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.17□□□□□ -0.3
Sox4Q06831 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox4Q06831 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sox4Q06831 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Gm6152-201ENSMUST00000151704 340 ntBASIC13.17□□□□□ -0.3
Sox4Q06831 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox4Q06831 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox4Q06831 Gm18473-201ENSMUST00000220543 868 ntBASIC13.17□□□□□ -0.3
Sox4Q06831 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.17□□□□□ -0.3
Sox4Q06831 Itm2b-204ENSMUST00000228637 783 ntBASIC13.17□□□□□ -0.3
Sox4Q06831 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.17□□□□□ -0.3
Sox4Q06831 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox4Q06831 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Sox4Q06831 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox4Q06831 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.16□□□□□ -0.3
Sox4Q06831 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.16□□□□□ -0.3
Sox4Q06831 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sox4Q06831 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.16□□□□□ -0.3
Sox4Q06831 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.16□□□□□ -0.3
Sox4Q06831 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox4Q06831 Gm8602-201ENSMUST00000184045 607 ntBASIC13.16□□□□□ -0.3
Sox4Q06831 Gm27839-201ENSMUST00000184242 106 ntBASIC13.16□□□□□ -0.3
Sox4Q06831 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox4Q06831 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Sox4Q06831 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox4Q06831 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox4Q06831 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox4Q06831 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms