Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.78□□□□□ -0.52
Thbs3Q05895 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.78□□□□□ -0.52
Thbs3Q05895 Gm29608-201ENSMUST00000190444 463 ntBASIC11.78□□□□□ -0.52
Thbs3Q05895 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Thbs3Q05895 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Thbs3Q05895 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.77□□□□□ -0.52
Thbs3Q05895 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Thbs3Q05895 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.77□□□□□ -0.52
Thbs3Q05895 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Thbs3Q05895 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Thbs3Q05895 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.77□□□□□ -0.53
Thbs3Q05895 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.77□□□□□ -0.53
Thbs3Q05895 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm15678-201ENSMUST00000117573 960 ntBASIC11.77□□□□□ -0.53
Thbs3Q05895 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.77□□□□□ -0.53
Thbs3Q05895 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm18018-201ENSMUST00000198273 408 ntBASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm6983-201ENSMUST00000214912 628 ntBASIC11.77□□□□□ -0.53
Thbs3Q05895 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Thbs3Q05895 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thbs3Q05895 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gm13689-201ENSMUST00000119360 685 ntBASIC11.76□□□□□ -0.53
Thbs3Q05895 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gm44397-201ENSMUST00000195950 113 ntBASIC11.76□□□□□ -0.53
Thbs3Q05895 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.76□□□□□ -0.53
Thbs3Q05895 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.76□□□□□ -0.53
Thbs3Q05895 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms