Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sox9Q04887 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox9Q04887 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sox9Q04887 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Gm13665-201ENSMUST00000120830 528 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Gm12363-201ENSMUST00000122250 668 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Gm9550-201ENSMUST00000161130 862 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox9Q04887 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.81□□□□□ -0.2
Sox9Q04887 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.81□□□□□ -0.2
Sox9Q04887 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.81□□□□□ -0.2
Sox9Q04887 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.81□□□□□ -0.2
Sox9Q04887 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox9Q04887 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sox9Q04887 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sox9Q04887 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sox9Q04887 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.81□□□□□ -0.2
Sox9Q04887 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox9Q04887 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox9Q04887 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.8□□□□□ -0.2
Sox9Q04887 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Sox9Q04887 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox9Q04887 Gm23270-201ENSMUST00000104055 131 ntBASIC13.8□□□□□ -0.2
Sox9Q04887 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Sox9Q04887 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox9Q04887 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 AA914427-201ENSMUST00000193194 1166 ntBASIC13.8□□□□□ -0.2
Sox9Q04887 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox9Q04887 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.8□□□□□ -0.2
Sox9Q04887 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox9Q04887 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox9Q04887 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms