Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Gm27631-201ENSMUST00000184163 466 ntBASIC13.66□□□□□ -0.22
Thumpd3P97770 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.66□□□□□ -0.22
Thumpd3P97770 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Gm37714-201ENSMUST00000194742 342 ntBASIC13.66□□□□□ -0.22
Thumpd3P97770 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Dupd1-202ENSMUST00000224735 548 ntBASIC13.66□□□□□ -0.22
Thumpd3P97770 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.66□□□□□ -0.22
Thumpd3P97770 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Thumpd3P97770 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.66□□□□□ -0.22
Thumpd3P97770 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Thumpd3P97770 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd3P97770 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Thumpd3P97770 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Gm7488-201ENSMUST00000117148 684 ntBASIC13.65□□□□□ -0.22
Thumpd3P97770 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.65□□□□□ -0.22
Thumpd3P97770 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.65□□□□□ -0.22
Thumpd3P97770 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.65□□□□□ -0.22
Thumpd3P97770 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
Thumpd3P97770 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.65□□□□□ -0.22
Thumpd3P97770 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Thumpd3P97770 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd3P97770 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Thumpd3P97770 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Thumpd3P97770 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms