Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.24□□□□□ -0.61
Npas1P97459 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Gm2445-201ENSMUST00000182798 989 ntBASIC11.24□□□□□ -0.61
Npas1P97459 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.24□□□□□ -0.61
Npas1P97459 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.24□□□□□ -0.61
Npas1P97459 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.24□□□□□ -0.61
Npas1P97459 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Npas1P97459 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.23□□□□□ -0.61
Npas1P97459 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.23□□□□□ -0.61
Npas1P97459 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.23□□□□□ -0.61
Npas1P97459 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.23□□□□□ -0.61
Npas1P97459 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.23□□□□□ -0.61
Npas1P97459 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.23□□□□□ -0.61
Npas1P97459 Gm18195-201ENSMUST00000207604 706 ntBASIC11.23□□□□□ -0.61
Npas1P97459 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.23□□□□□ -0.61
Npas1P97459 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Npas1P97459 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.23□□□□□ -0.61
Npas1P97459 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Npas1P97459 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Npas1P97459 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Npas1P97459 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Npas1P97459 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Npas1P97459 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Npas1P97459 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.22□□□□□ -0.61
Npas1P97459 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Npas1P97459 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.22□□□□□ -0.61
Npas1P97459 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms