Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hmgb1P63158 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Gm27306-201ENSMUST00000183970 107 ntBASIC14.78□□□□□ -0.04
Hmgb1P63158 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.78□□□□□ -0.04
Hmgb1P63158 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.78□□□□□ -0.04
Hmgb1P63158 AC129336.1-201ENSMUST00000220224 2277 ntBASIC14.78□□□□□ -0.04
Hmgb1P63158 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmgb1P63158 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hmgb1P63158 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.78□□□□□ -0.04
Hmgb1P63158 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb1P63158 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Hmgb1P63158 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb1P63158 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hmgb1P63158 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb1P63158 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.76□□□□□ -0.05
Hmgb1P63158 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.76□□□□□ -0.05
Hmgb1P63158 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.76□□□□□ -0.05
Hmgb1P63158 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.76□□□□□ -0.05
Hmgb1P63158 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.76□□□□□ -0.05
Hmgb1P63158 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms