Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.54□□□□□ -0.88
Rpl39P62892 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.54□□□□□ -0.88
Rpl39P62892 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Rpl39P62892 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rpl39P62892 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rpl39P62892 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.54□□□□□ -0.88
Rpl39P62892 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Rpl39P62892 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Rpl39P62892 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.54□□□□□ -0.88
Rpl39P62892 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rpl39P62892 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Rpl39P62892 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.53□□□□□ -0.88
Rpl39P62892 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Gm11025-201ENSMUST00000140773 466 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.53□□□□□ -0.88
Rpl39P62892 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.53□□□□□ -0.88
Rpl39P62892 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Gm27631-201ENSMUST00000184163 466 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 Gm5364-201ENSMUST00000216789 889 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.53□□□□□ -0.88
Rpl39P62892 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rpl39P62892 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rpl39P62892 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.53□□□□□ -0.88
Rpl39P62892 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms