Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.78□□□□□ -0.52
Lsm6P62313 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lsm6P62313 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.78□□□□□ -0.52
Lsm6P62313 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Lsm6P62313 Gm19220-201ENSMUST00000222682 803 ntBASIC11.78□□□□□ -0.52
Lsm6P62313 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Lsm6P62313 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.78□□□□□ -0.52
Lsm6P62313 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lsm6P62313 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Lsm6P62313 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.78□□□□□ -0.52
Lsm6P62313 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Lsm6P62313 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lsm6P62313 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm6P62313 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm6P62313 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.77□□□□□ -0.52
Lsm6P62313 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.77□□□□□ -0.52
Lsm6P62313 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.77□□□□□ -0.52
Lsm6P62313 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm6P62313 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.77□□□□□ -0.52
Lsm6P62313 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lsm6P62313 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Lsm6P62313 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm6P62313 Gm42612-201ENSMUST00000197986 623 ntBASIC11.77□□□□□ -0.53
Lsm6P62313 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lsm6P62313 Gm43170-201ENSMUST00000199827 612 ntBASIC11.77□□□□□ -0.53
Lsm6P62313 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.77□□□□□ -0.53
Lsm6P62313 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lsm6P62313 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm6P62313 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm6P62313 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.76□□□□□ -0.53
Lsm6P62313 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lsm6P62313 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lsm6P62313 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Lsm6P62313 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lsm6P62313 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.76□□□□□ -0.53
Lsm6P62313 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Lsm6P62313 Gm15376-201ENSMUST00000122258 783 ntBASIC11.76□□□□□ -0.53
Lsm6P62313 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Gm16215-201ENSMUST00000161990 637 ntBASIC11.76□□□□□ -0.53
Lsm6P62313 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.76□□□□□ -0.53
Lsm6P62313 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.76□□□□□ -0.53
Lsm6P62313 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.76□□□□□ -0.53
Lsm6P62313 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.76□□□□□ -0.53
Lsm6P62313 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lsm6P62313 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.76□□□□□ -0.53
Lsm6P62313 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms