Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sec61a1P61620 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.83□□□□□ -0.52
Sec61a1P61620 Pck2-205ENSMUST00000226352 2784 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a1P61620 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Mir6977-201ENSMUST00000184960 64 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.83□□□□□ -0.52
Sec61a1P61620 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.83□□□□□ -0.52
Sec61a1P61620 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.83□□□□□ -0.52
Sec61a1P61620 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a1P61620 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a1P61620 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.82□□□□□ -0.52
Sec61a1P61620 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.82□□□□□ -0.52
Sec61a1P61620 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sec61a1P61620 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.82□□□□□ -0.52
Sec61a1P61620 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Mir7684-201ENSMUST00000183858 60 ntBASIC11.82□□□□□ -0.52
Sec61a1P61620 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.82□□□□□ -0.52
Sec61a1P61620 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a1P61620 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a1P61620 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a1P61620 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.81□□□□□ -0.52
Sec61a1P61620 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms