Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.91□□□□□ -0.5
Sf3b6P59708 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.9□□□□□ -0.5
Sf3b6P59708 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Mir7221-201ENSMUST00000184009 72 ntBASIC11.9□□□□□ -0.5
Sf3b6P59708 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.9□□□□□ -0.5
Sf3b6P59708 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.9□□□□□ -0.5
Sf3b6P59708 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sf3b6P59708 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.9□□□□□ -0.5
Sf3b6P59708 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sf3b6P59708 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sf3b6P59708 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sf3b6P59708 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sf3b6P59708 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm12428-201ENSMUST00000119844 727 ntBASIC11.89□□□□□ -0.51
Sf3b6P59708 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm10253-201ENSMUST00000194270 940 ntBASIC11.89□□□□□ -0.51
Sf3b6P59708 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm6916-202ENSMUST00000205523 195 ntBASIC11.89□□□□□ -0.51
Sf3b6P59708 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm45841-201ENSMUST00000207700 164 ntBASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.89□□□□□ -0.51
Sf3b6P59708 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms