Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.66□□□□□ -0.38
Nup43P59235 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nup43P59235 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm12490-201ENSMUST00000120255 560 ntBASIC12.66□□□□□ -0.38
Nup43P59235 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup43P59235 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Nup43P59235 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nup43P59235 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.66□□□□□ -0.38
Nup43P59235 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.66□□□□□ -0.38
Nup43P59235 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Nup43P59235 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Nup43P59235 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup43P59235 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Nup43P59235 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup43P59235 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup43P59235 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.65□□□□□ -0.38
Nup43P59235 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.65□□□□□ -0.38
Nup43P59235 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.65□□□□□ -0.38
Nup43P59235 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup43P59235 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.65□□□□□ -0.38
Nup43P59235 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup43P59235 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.65□□□□□ -0.38
Nup43P59235 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.65□□□□□ -0.38
Nup43P59235 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.65□□□□□ -0.38
Nup43P59235 Gm26315-201ENSMUST00000083890 321 ntBASIC12.65□□□□□ -0.38
Nup43P59235 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nup43P59235 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup43P59235 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup43P59235 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.65□□□□□ -0.39
Nup43P59235 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nup43P59235 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nup43P59235 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Nup43P59235 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nup43P59235 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Gm12138-201ENSMUST00000122180 951 ntBASIC12.64□□□□□ -0.39
Nup43P59235 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms