Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Msh6P54276 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Msh6P54276 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Msh6P54276 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Gm16202-201ENSMUST00000117532 544 ntBASIC16.86■□□□□ 0.29
Msh6P54276 Gm12363-201ENSMUST00000122250 668 ntBASIC16.86■□□□□ 0.29
Msh6P54276 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.86■□□□□ 0.29
Msh6P54276 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.86■□□□□ 0.29
Msh6P54276 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.86■□□□□ 0.29
Msh6P54276 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.86■□□□□ 0.29
Msh6P54276 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.86■□□□□ 0.29
Msh6P54276 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh6P54276 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.85■□□□□ 0.29
Msh6P54276 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.85■□□□□ 0.29
Msh6P54276 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Morn2-202ENSMUST00000227729 656 ntBASIC16.85■□□□□ 0.29
Msh6P54276 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Msh6P54276 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Msh6P54276 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh6P54276 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Msh6P54276 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
Msh6P54276 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.84■□□□□ 0.29
Msh6P54276 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Msh6P54276 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Gm8805-201ENSMUST00000117848 313 ntBASIC16.84■□□□□ 0.29
Msh6P54276 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.84■□□□□ 0.29
Msh6P54276 Gm28693-202ENSMUST00000190758 331 ntBASIC16.84■□□□□ 0.29
Msh6P54276 Gm5363-201ENSMUST00000211927 938 ntBASIC16.84■□□□□ 0.29
Msh6P54276 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.84■□□□□ 0.29
Msh6P54276 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh6P54276 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Msh6P54276 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.83■□□□□ 0.29
Msh6P54276 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Msh6P54276 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Msh6P54276 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Msh6P54276 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Msh6P54276 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Msh6P54276 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Msh6P54276 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Msh6P54276 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.83■□□□□ 0.28
Msh6P54276 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh6P54276 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh6P54276 Gm11222-201ENSMUST00000119005 738 ntBASIC16.83■□□□□ 0.28
Msh6P54276 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.83■□□□□ 0.28
Msh6P54276 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.83■□□□□ 0.28
Msh6P54276 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms