Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Atxn1P54254 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.31□□□□□ -0.28
Atxn1P54254 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Atxn1P54254 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.3□□□□□ -0.28
Atxn1P54254 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atxn1P54254 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Mir6979-201ENSMUST00000183927 56 ntBASIC13.3□□□□□ -0.28
Atxn1P54254 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.3□□□□□ -0.28
Atxn1P54254 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.3□□□□□ -0.28
Atxn1P54254 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm18027-201ENSMUST00000218947 619 ntBASIC13.3□□□□□ -0.28
Atxn1P54254 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Gm10268-201ENSMUST00000085340 555 ntBASIC13.3□□□□□ -0.28
Atxn1P54254 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.3□□□□□ -0.28
Atxn1P54254 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atxn1P54254 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.3□□□□□ -0.28
Atxn1P54254 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Atxn1P54254 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atxn1P54254 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Atxn1P54254 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Atxn1P54254 Gm14263-201ENSMUST00000117955 746 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.29□□□□□ -0.28
Atxn1P54254 Gm25668-201ENSMUST00000157700 129 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Gm24420-201ENSMUST00000176676 59 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Gm8927-201ENSMUST00000181978 981 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Gm37986-201ENSMUST00000193285 383 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.29□□□□□ -0.28
Atxn1P54254 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Atxn1P54254 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atxn1P54254 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Atxn1P54254 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.29□□□□□ -0.28
Atxn1P54254 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms