Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.26□□□□□ -0.29
Pdx1P52946 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pdx1P52946 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pdx1P52946 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdx1P52946 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.25□□□□□ -0.29
Pdx1P52946 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pdx1P52946 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.25□□□□□ -0.29
Pdx1P52946 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.25□□□□□ -0.29
Pdx1P52946 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.25□□□□□ -0.29
Pdx1P52946 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pdx1P52946 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pdx1P52946 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Pdx1P52946 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pdx1P52946 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdx1P52946 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Pdx1P52946 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdx1P52946 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdx1P52946 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pdx1P52946 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.24□□□□□ -0.29
Pdx1P52946 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdx1P52946 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.24□□□□□ -0.29
Pdx1P52946 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Gm27701-201ENSMUST00000184498 110 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Gm28911-201ENSMUST00000188837 117 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pdx1P52946 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Gm26315-201ENSMUST00000083890 321 ntBASIC13.24□□□□□ -0.29
Pdx1P52946 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pdx1P52946 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdx1P52946 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.23□□□□□ -0.29
Pdx1P52946 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.23□□□□□ -0.29
Pdx1P52946 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdx1P52946 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms