Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 Gm29787-201ENSMUST00000222129 849 ntBASIC15.06■□□□□ 0
Atoh1P48985 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.06■□□□□ 0
Atoh1P48985 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atoh1P48985 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atoh1P48985 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Atoh1P48985 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.06■□□□□ 0
Atoh1P48985 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atoh1P48985 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atoh1P48985 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Atoh1P48985 Gm11930-201ENSMUST00000117788 190 ntBASIC15.05■□□□□ -0
Atoh1P48985 Gm13665-201ENSMUST00000120830 528 ntBASIC15.05■□□□□ -0
Atoh1P48985 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.05■□□□□ -0
Atoh1P48985 Gm11978-201ENSMUST00000122315 466 ntBASIC15.05■□□□□ -0
Atoh1P48985 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.05■□□□□ -0
Atoh1P48985 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.05■□□□□ -0
Atoh1P48985 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Atoh1P48985 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.05■□□□□ -0
Atoh1P48985 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.05■□□□□ -0
Atoh1P48985 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Atoh1P48985 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atoh1P48985 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Atoh1P48985 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atoh1P48985 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.04■□□□□ -0
Atoh1P48985 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atoh1P48985 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Atoh1P48985 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.04■□□□□ -0
Atoh1P48985 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.04■□□□□ -0
Atoh1P48985 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.04■□□□□ -0
Atoh1P48985 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.04■□□□□ -0
Atoh1P48985 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.04■□□□□ -0
Atoh1P48985 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Atoh1P48985 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Atoh1P48985 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atoh1P48985 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atoh1P48985 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.04■□□□□ -0
Atoh1P48985 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Atoh1P48985 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atoh1P48985 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Atoh1P48985 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Atoh1P48985 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.03■□□□□ -0
Atoh1P48985 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.03■□□□□ -0
Atoh1P48985 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Atoh1P48985 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atoh1P48985 Gm14208-201ENSMUST00000119645 678 ntBASIC15.03■□□□□ -0
Atoh1P48985 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.03■□□□□ -0
Atoh1P48985 Gm5523-201ENSMUST00000180415 997 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms