Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm27552-201ENSMUST00000183351 62 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm27844-201ENSMUST00000183613 62 ntBASIC14.76□□□□□ -0.05
Brca1P48754 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Brca1P48754 Gm43058-201ENSMUST00000197645 625 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.76□□□□□ -0.05
Brca1P48754 Gm5904-201ENSMUST00000210286 865 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm7848-201ENSMUST00000210739 718 ntBASIC14.76□□□□□ -0.05
Brca1P48754 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.75□□□□□ -0.05
Brca1P48754 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.75□□□□□ -0.05
Brca1P48754 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.75□□□□□ -0.05
Brca1P48754 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.75□□□□□ -0.05
Brca1P48754 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.75□□□□□ -0.05
Brca1P48754 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.75□□□□□ -0.05
Brca1P48754 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
Brca1P48754 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.75□□□□□ -0.05
Brca1P48754 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Brca1P48754 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Brca1P48754 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.75□□□□□ -0.05
Brca1P48754 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brca1P48754 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Brca1P48754 Gm13045-201ENSMUST00000119019 712 ntBASIC14.74□□□□□ -0.05
Brca1P48754 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.74□□□□□ -0.05
Brca1P48754 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Brca1P48754 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Brca1P48754 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.74□□□□□ -0.05
Brca1P48754 Gm8712-201ENSMUST00000221090 701 ntBASIC14.74□□□□□ -0.05
Brca1P48754 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.74□□□□□ -0.05
Brca1P48754 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Mir339-201ENSMUST00000083659 96 ntBASIC14.74□□□□□ -0.05
Brca1P48754 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Brca1P48754 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Brca1P48754 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.74□□□□□ -0.05
Brca1P48754 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brca1P48754 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Brca1P48754 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.73□□□□□ -0.05
Brca1P48754 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.73□□□□□ -0.05
Brca1P48754 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.73□□□□□ -0.05
Brca1P48754 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.73□□□□□ -0.05
Brca1P48754 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.73□□□□□ -0.05
Brca1P48754 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Ntng1-201ENSMUST00000051253 327 ntBASIC14.73□□□□□ -0.05
Brca1P48754 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.73□□□□□ -0.05
Brca1P48754 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Brca1P48754 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Gm16296-201ENSMUST00000159905 325 ntBASIC14.73□□□□□ -0.05
Brca1P48754 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Brca1P48754 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.73□□□□□ -0.05
Brca1P48754 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.73□□□□□ -0.05
Brca1P48754 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms