Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.77□□□□□ -0.53
GdnfP48540 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.77□□□□□ -0.53
GdnfP48540 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.77□□□□□ -0.53
GdnfP48540 Dupd1-202ENSMUST00000224735 548 ntBASIC11.77□□□□□ -0.53
GdnfP48540 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.77□□□□□ -0.53
GdnfP48540 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Mir125a-201ENSMUST00000083545 68 ntBASIC11.77□□□□□ -0.53
GdnfP48540 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.77□□□□□ -0.53
GdnfP48540 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.77□□□□□ -0.53
GdnfP48540 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.77□□□□□ -0.53
GdnfP48540 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.77□□□□□ -0.53
GdnfP48540 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
GdnfP48540 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.76□□□□□ -0.53
GdnfP48540 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
GdnfP48540 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
GdnfP48540 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.76□□□□□ -0.53
GdnfP48540 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Gm24543-201ENSMUST00000103867 82 ntBASIC11.76□□□□□ -0.53
GdnfP48540 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.76□□□□□ -0.53
GdnfP48540 Gm27622-201ENSMUST00000183779 60 ntBASIC11.76□□□□□ -0.53
GdnfP48540 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.76□□□□□ -0.53
GdnfP48540 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.76□□□□□ -0.53
GdnfP48540 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
GdnfP48540 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
GdnfP48540 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.76□□□□□ -0.53
GdnfP48540 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
GdnfP48540 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
GdnfP48540 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
GdnfP48540 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.76□□□□□ -0.53
GdnfP48540 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.75□□□□□ -0.53
GdnfP48540 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
GdnfP48540 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
GdnfP48540 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Gm20614-201ENSMUST00000177106 632 ntBASIC11.75□□□□□ -0.53
GdnfP48540 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
GdnfP48540 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
GdnfP48540 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Gm16476-201ENSMUST00000221544 139 ntBASIC11.75□□□□□ -0.53
GdnfP48540 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
GdnfP48540 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.75□□□□□ -0.53
GdnfP48540 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms