Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdx2P43241 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.69□□□□□ -0.38
Cdx2P43241 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdx2P43241 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdx2P43241 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdx2P43241 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdx2P43241 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdx2P43241 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdx2P43241 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Cdx2P43241 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.68□□□□□ -0.38
Cdx2P43241 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdx2P43241 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdx2P43241 Gm11964-201ENSMUST00000120982 444 ntBASIC12.68□□□□□ -0.38
Cdx2P43241 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.68□□□□□ -0.38
Cdx2P43241 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.68□□□□□ -0.38
Cdx2P43241 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cdx2P43241 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdx2P43241 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdx2P43241 Gm3786-201ENSMUST00000202659 378 ntBASIC12.68□□□□□ -0.38
Cdx2P43241 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdx2P43241 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Cdx2P43241 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cdx2P43241 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx2P43241 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdx2P43241 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm11222-201ENSMUST00000119005 738 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdx2P43241 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.67□□□□□ -0.38
Cdx2P43241 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdx2P43241 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdx2P43241 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdx2P43241 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm5363-201ENSMUST00000211927 938 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdx2P43241 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdx2P43241 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx2P43241 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.67□□□□□ -0.38
Cdx2P43241 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdx2P43241 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdx2P43241 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx2P43241 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdx2P43241 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdx2P43241 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx2P43241 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdx2P43241 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.66□□□□□ -0.38
Cdx2P43241 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx2P43241 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdx2P43241 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx2P43241 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdx2P43241 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdx2P43241 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx2P43241 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms