Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cd9P40240 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.21□□□□□ -0.29
Cd9P40240 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cd9P40240 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cd9P40240 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cd9P40240 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cd9P40240 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.21□□□□□ -0.29
Cd9P40240 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.21□□□□□ -0.29
Cd9P40240 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.21□□□□□ -0.29
Cd9P40240 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.21□□□□□ -0.29
Cd9P40240 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.21□□□□□ -0.29
Cd9P40240 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Cd9P40240 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd9P40240 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.21□□□□□ -0.3
Cd9P40240 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.21□□□□□ -0.3
Cd9P40240 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd9P40240 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cd9P40240 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cd9P40240 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd9P40240 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Gm11978-201ENSMUST00000122315 466 ntBASIC13.2□□□□□ -0.3
Cd9P40240 Gm15429-201ENSMUST00000151268 798 ntBASIC13.2□□□□□ -0.3
Cd9P40240 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.2□□□□□ -0.3
Cd9P40240 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.2□□□□□ -0.3
Cd9P40240 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cd9P40240 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cd9P40240 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.2□□□□□ -0.3
Cd9P40240 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.2□□□□□ -0.3
Cd9P40240 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.2□□□□□ -0.3
Cd9P40240 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.2□□□□□ -0.3
Cd9P40240 Itm2b-204ENSMUST00000228637 783 ntBASIC13.2□□□□□ -0.3
Cd9P40240 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.2□□□□□ -0.3
Cd9P40240 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd9P40240 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd9P40240 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd9P40240 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cd9P40240 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cd9P40240 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cd9P40240 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.19□□□□□ -0.3
Cd9P40240 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.19□□□□□ -0.3
Cd9P40240 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.19□□□□□ -0.3
Cd9P40240 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Gm5866-201ENSMUST00000177881 973 ntBASIC13.19□□□□□ -0.3
Cd9P40240 Gm2495-201ENSMUST00000191160 466 ntBASIC13.19□□□□□ -0.3
Cd9P40240 Gm10576-201ENSMUST00000191927 825 ntBASIC13.19□□□□□ -0.3
Cd9P40240 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.19□□□□□ -0.3
Cd9P40240 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.19□□□□□ -0.3
Cd9P40240 Gm18473-201ENSMUST00000220543 868 ntBASIC13.19□□□□□ -0.3
Cd9P40240 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd9P40240 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms